ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O13936_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/O13936_F1_nD5

O13936_F1_nD5

UID: 003740756

AlphaFold

Range: 576-625
AlphaFold: AF-O13936
UniProt: O13936 (all domains)
Gene: spt5

Protein: Transcription elongation factor spt5 (Chromatin elongation factor spt5)

3D Structure

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Related Domains

Browse other domains in KOWx_SPT5 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyKOWx_SPT5(4.1.1.236)

Pfam Families

PF23037KOWx_SPT5

Transcription elongation factor SPT5, KOWx domain

ClanCL0010SH3

External Links

AlphaFold DB: O13936 UniProt: O13936

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 576-625