ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O13903_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/O13903_F1_nD3

O13903_F1_nD3

UID: 003741405

AlphaFold

Range: 161-240
AlphaFold: AF-O13903
UniProt: O13903 (all domains)
Gene: rrp40

Protein: Exosome complex component rrp40 (Ribosomal RNA-processing protein 40)

3D Structure

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Related Domains

Browse other domains in KH_6 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupKH-domains(327.11)

TT-groupEukaryotic type KH-domain (KH-domain type I)(327.11.2)

FFamilyKH_6(327.11.2.3)

Pfam Families

KH domain

ClanCL0007KH

External Links

AlphaFold DB: O13903 UniProt: O13903

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 161-240