ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P87129_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P87129_F1_nD1

P87129_F1_nD1

UID: 003741546

AlphaFold

Range: 36-715
AlphaFold: AF-P87129
UniProt: P87129 (all domains)
Gene: vps53

Protein: Vacuolar protein sorting-associated protein 53 (GARP complex subunit vps53)

3D Structure

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Related Domains

Browse other domains in Vps53_N, VPS53_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps53_N, VPS53_C(109.4.1.1317)

Pfam Families

PF04100Vps53_N

Vps53, N-terminal

ClanCL0020TPR

PF16854VPS53_C

Vacuolar protein sorting-associated protein 53 C-terminus

ClanCL0020TPR

External Links

AlphaFold DB: P87129 UniProt: P87129

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-715