ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q09907_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q09907_F1_nD1

Q09907_F1_nD1

UID: 003742059

AlphaFold

Range: 6-235
AlphaFold: AF-Q09907
UniProt: Q09907 (all domains)
Gene: nth1

Protein: Endonuclease III homolog (EC 3.2.2.-) (EC 4.2.99.18) (Bifunctional DNA N-glycosylase/DNA-(apurinic or apyrimidinic site) lyase) (DNA glycosylase/AP lyase)

3D Structure

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Related Domains

Browse other domains in HHH,HhH-GPD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupDNA-glycosylase(102.1.2)

FFamilyHHH,HhH-GPD(102.1.2.8)

Pfam Families

Helix-hairpin-helix motif

ClanCL0198HHH

PF00730HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

ClanCL0198HHH

External Links

AlphaFold DB: Q09907 UniProt: Q09907

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-235