ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O13282_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O13282_F1_nD2

O13282_F1_nD2

UID: 003742297

AlphaFold

Range: 41-220
AlphaFold: AF-O13282
UniProt: O13282 (all domains)
Gene: taf5

Protein: SAGA complex/transcription factor TFIID complex subunit Taf5 (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72) (Transcription initiation factor TFIID subunit 5)

3D Structure

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Related Domains

Browse other domains in TFIID_NTD2 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupTaf5 N-terminal domain-like(4320)

HH-groupTaf5 N-terminal domain-like(4320.1)

TT-groupTaf5 N-terminal domain-like(4320.1.1)

FFamilyTFIID_NTD2(4320.1.1.1)

Pfam Families

PF04494TFIID_NTD2

WD40 associated region in TFIID subunit, NTD2 domain

External Links

AlphaFold DB: O13282 UniProt: O13282

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-220