ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O13935_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O13935_F1_nD2

O13935_F1_nD2

UID: 003743124

AlphaFold

Range: 481-590
AlphaFold: AF-O13935
UniProt: O13935 (all domains)
Gene: trm4b

Protein: Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b (EC 2.1.1.-) (tRNA (cytosine-5-)-methyltransferase trm4b)

3D Structure

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Related Domains

Browse other domains in Pre-PUA_NSUN2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCystatin-like(243)

HH-groupPre-PUA domain(243.6)

TT-groupPre-PUA domain(243.6.1)

FFamilyPre-PUA_NSUN2(243.6.1.10)

Pfam Families

PF25376Pre-PUA_NSUN2

NSUN2 Pre-PUA domain

ClanCL0668Pre-PUA

External Links

AlphaFold DB: O13935 UniProt: O13935

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 481-590