ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O13903_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O13903_F1_nD2

O13903_F1_nD2

UID: 003743871

AlphaFold

Range: 71-160
AlphaFold: AF-O13903
UniProt: O13903 (all domains)
Gene: rrp40

Protein: Exosome complex component rrp40 (Ribosomal RNA-processing protein 40)

3D Structure

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Related Domains

Browse other domains in RRP40_S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRRP40_S1(2.1.1.107)

Pfam Families

PF21262RRP40_S1

Exosome complex component RRP40, S1 domain

ClanCL0021OB

External Links

AlphaFold DB: O13903 UniProt: O13903

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 71-160