ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0U1RS25_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A0U1RS25_F1_nD4

A0A0U1RS25_F1_nD4

UID: 003745945

AlphaFold

Range: 706-920
AlphaFold: AF-A0A0U1RS25
UniProt: A0A0U1RS25 (all domains)
Gene: Upf1

Protein: Regulator of nonsense transcripts 1 (ATP-dependent helicase RENT1) (Nonsense mRNA reducing factor 1) (Up-frameshift suppressor 1 homolog)

3D Structure

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Related Domains

Browse other domains in AAA_12 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_12(2004.1.1.186)

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: A0A0U1RS25 UniProt: A0A0U1RS25

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 706-920