ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D3Z9E6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/D3Z9E6_F1_nD1

D3Z9E6_F1_nD1

UID: 003748375

AlphaFold

Range: 1-210,541-635
AlphaFold: AF-D3Z9E6
UniProt: D3Z9E6 (all domains)
Gene: Cpsf2

Protein: Cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit)

3D Structure

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Related Domains

Browse other domains in RMMBL,Lactamase_B_6 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyRMMBL,Lactamase_B_6(247.1.1.8)

Pfam Families

Zn-dependent metallo-hydrolase RNA specificity domain

ClanCL0398RMMBL_DRMBL

PF16661Lactamase_B_6

Metallo-beta-lactamase superfamily domain

ClanCL0381Metallo-HOrase

External Links

AlphaFold DB: D3Z9E6 UniProt: D3Z9E6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-210,541-635