ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D4AAG8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/D4AAG8_F1_nD3

D4AAG8_F1_nD3

UID: 003752497

AlphaFold

Range: 401-575
AlphaFold: AF-D4AAG8
UniProt: D4AAG8 (all domains)
Gene: Smchd1

Protein: Structural maintenance of chromosomes flexible hinge domain containing 1

3D Structure

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Related Domains

Browse other domains in SMCHD1_S5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilySMCHD1_S5(212.1.1.26)

Pfam Families

PF22899SMCHD1_S5

SMCHD1, ribosomal S5 domain 2-like domain

ClanCL0329S5

External Links

AlphaFold DB: D4AAG8 UniProt: D4AAG8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 401-575