ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5RK30_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5RK30_F1_nD2

Q5RK30_F1_nD2

UID: 003754714

AlphaFold

Range: 96-165
AlphaFold: AF-Q5RK30
UniProt: Q5RK30 (all domains)
Gene: Sbds

Protein: Ribosome maturation protein SBDS (Shwachman-Bodian-Diamond syndrome protein homolog)

3D Structure

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Related Domains

Browse other domains in SBDS_domain_II →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupHypothetical protein AF0491, middle domain(103.8)

TT-groupHypothetical protein AF0491, middle domain(103.8.1)

FFamilySBDS_domain_II(103.8.1.1)

Pfam Families

PF09377SBDS_domain_II

SBDS protein, domain II

ClanCL0437EF-G_C

External Links

AlphaFold DB: Q5RK30 UniProt: Q5RK30

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-165