ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O88806_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O88806_F1_nD2

O88806_F1_nD2

UID: 003756589

AlphaFold

Range: 111-290
AlphaFold: AF-O88806
UniProt: O88806 (all domains)
Gene: Padi1

Protein: Protein-arginine deiminase type-1 (EC 3.5.3.15) (PAD-R11) (Peptidylarginine deiminase I) (Protein-arginine deiminase type I)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PAD_M →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCommon fold of diphtheria toxin/transcription factors/cytochrome f(11.1.5)

FFamilyPAD_M(11.1.5.30)

Pfam Families

Protein-arginine deiminase (PAD) middle domain

ClanCL0073P53-like

External Links

AlphaFold DB: O88806 UniProt: O88806

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 111-290