ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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F1LVC4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F1LVC4_F1_nD2

F1LVC4_F1_nD2

UID: 003757351

AlphaFold

Range: 71-135
AlphaFold: AF-F1LVC4
UniProt: F1LVC4 (all domains)
Gene: Tigd2

Protein: Tigger transposable element derived 2

3D Structure

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Related Domains

Browse other domains in HTH_Tnp_Tc5 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyHTH_Tnp_Tc5(101.1.1.21)

Pfam Families

PF03221HTH_Tnp_Tc5

Tc5 transposase DNA-binding domain

ClanCL0123HTH

External Links

AlphaFold DB: F1LVC4 UniProt: F1LVC4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 71-135