ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A096MJU6_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A096MJU6_F1_nD3

A0A096MJU6_F1_nD3

UID: 003758129

AlphaFold

Range: 631-660
AlphaFold: AF-A0A096MJU6
UniProt: A0A096MJU6 (all domains)
Gene: Prdm1

Protein: PR domain zinc finger protein 1 (EC 2.1.1.-)

3D Structure

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Related Domains

Browse other domains in zf-C2H2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-C2H2(386.1.1.1)

Pfam Families

PF00096zf-C2H2

Zinc finger, C2H2 type

ClanCL0361C2H2-zf

External Links

AlphaFold DB: A0A096MJU6 UniProt: A0A096MJU6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 631-660