ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

F7F9J5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F7F9J5_F1_nD2

F7F9J5_F1_nD2

UID: 003758297

AlphaFold

Range: 271-340
AlphaFold: AF-F7F9J5
UniProt: F7F9J5 (all domains)
Gene: AABR07018556.1

Protein: LINE-1 retrotransposable element ORF1 protein (LINE retrotransposable element 1) (LINE1 retrotransposable element 1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Tnp_22_dsRBD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupC-terminal domain in LINE-1 ORF1p(330.9)

TT-groupC-terminal domain in LINE-1 ORF1p(330.9.1)

FFamilyTnp_22_dsRBD(330.9.1.1)

Pfam Families

PF17490Tnp_22_dsRBD

L1 transposable element dsRBD-like domain

External Links

AlphaFold DB: F7F9J5 UniProt: F7F9J5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 271-340