ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F1M0Q9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/F1M0Q9_F1_nD1

F1M0Q9_F1_nD1

UID: 003758957

AlphaFold

Range: 6-210,366-465
AlphaFold: AF-F1M0Q9
UniProt: F1M0Q9 (all domains)
Gene: Pm20d1

Protein: N-fatty-acyl-amino acid synthase/hydrolase PM20D1 (EC 3.5.1.114) (EC 3.5.1.14) (Peptidase M20 domain-containing protein 1)

3D Structure

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Related Domains

Browse other domains in Peptidase_M20, Peptidase_M28 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M20, Peptidase_M28(2011.1.1.20)

Pfam Families

PF01546Peptidase_M20

Peptidase family M20/M25/M40

ClanCL0865ZnExoPePases

PF04389Peptidase_M28

Peptidase family M28

ClanCL0865ZnExoPePases

External Links

AlphaFold DB: F1M0Q9 UniProt: F1M0Q9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-210,366-465