ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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B0BMZ5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/B0BMZ5_F1_nD1

B0BMZ5_F1_nD1

UID: 003759573

AlphaFold

Range: 21-165
AlphaFold: AF-B0BMZ5
UniProt: B0BMZ5 (all domains)
Gene: Stambpl1

Protein: AMSH-like protease (STAM-binding protein-like 1)

3D Structure

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Related Domains

Browse other domains in USP8_dimer →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSpectrin repeat-like(604)

HH-groupUSP8 N-terminal domain-like(604.13)

TT-groupUSP8 N-terminal domain-like(604.13.1)

FFamilyUSP8_dimer(604.13.1.1)

Pfam Families

PF08969USP8_dimer

USP8 dimerisation domain

External Links

AlphaFold DB: B0BMZ5 UniProt: B0BMZ5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-165