ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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B5DF80_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/B5DF80_F1_nD3

B5DF80_F1_nD3

UID: 003759634

AlphaFold

Range: 186-280
AlphaFold: AF-B5DF80
UniProt: B5DF80 (all domains)
Gene: Pabpc6

Protein: Polyadenylate-binding protein (PABP)

3D Structure

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Related Domains

Browse other domains in RRM_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

AlphaFold DB: B5DF80 UniProt: B5DF80

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 186-280