ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O88984_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O88984_F1_nD1

O88984_F1_nD1

UID: 003759659

AlphaFold

Range: 106-200
AlphaFold: AF-O88984
UniProt: O88984 (all domains)
Gene: Nxf1

Protein: Nuclear RNA export factor 1 (Tip-associated protein) (Tip-associating protein) (mRNA export factor TAP)

3D Structure

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Related Domains

Browse other domains in Tap-RNA_bind →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyTap-RNA_bind(304.9.1.18)

Pfam Families

PF09162Tap-RNA_bind

Tap, RNA-binding

ClanCL0221RRM

External Links

AlphaFold DB: O88984 UniProt: O88984

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 106-200