ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O88984_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/O88984_F1_nD4

O88984_F1_nD4

UID: 003759672

AlphaFold

Range: 561-618
AlphaFold: AF-O88984
UniProt: O88984 (all domains)
Gene: Nxf1

Protein: Nuclear RNA export factor 1 (Tip-associated protein) (Tip-associating protein) (mRNA export factor TAP)

3D Structure

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Related Domains

Browse other domains in TAP_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyTAP_C(103.1.1.4)

Pfam Families

TAP C-terminal domain

ClanCL0214UBA

External Links

AlphaFold DB: O88984 UniProt: O88984

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 561-618