ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8VIG2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8VIG2_F1_nD2

Q8VIG2_F1_nD2

UID: 003760216

AlphaFold

Range: 506-580
AlphaFold: AF-Q8VIG2
UniProt: Q8VIG2 (all domains)
Gene: Marf1

Protein: Meiosis regulator and mRNA stability factor 1 (Limkain-b1) (Meiosis arrest female protein 1)

3D Structure

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Related Domains

Browse other domains in MARF1_RRM1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyMARF1_RRM1(304.9.1.19)

Pfam Families

PF11608RRM_MARF1

MARF1, RNA recognition motif 1

ClanCL0221RRM

External Links

AlphaFold DB: Q8VIG2 UniProt: Q8VIG2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 506-580