ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P58200_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P58200_F1_nD1

P58200_F1_nD1

UID: 003761712

AlphaFold

Range: 6-100
AlphaFold: AF-P58200
UniProt: P58200 (all domains)
Gene: Vti1b

Protein: Vesicle transport through interaction with t-SNAREs homolog 1B (Vesicle transport v-SNARE protein Vti1-like 1) (Vti1-rp1)

3D Structure

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Related Domains

Browse other domains in V-SNARE →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSTAT-like(603)

HH-groupt-snare proteins(603.1)

TT-groupt-snare proteins(603.1.1)

FFamilyV-SNARE(603.1.1.3)

Pfam Families

PF05008V-SNARE

Vesicle transport v-SNARE protein N-terminus

ClanCL0445SNARE-fusion

External Links

AlphaFold DB: P58200 UniProt: P58200

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-100