ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0G2JVX1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A0G2JVX1_F1_nD3

A0A0G2JVX1_F1_nD3

UID: 003762083

AlphaFold

Range: 291-355
AlphaFold: AF-A0A0G2JVX1
UniProt: A0A0G2JVX1 (all domains)
Gene: Slx4ip

Protein: LINE-1 retrotransposable element ORF1 protein (LINE retrotransposable element 1) (LINE1 retrotransposable element 1)

3D Structure

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Related Domains

Browse other domains in Tnp_22_dsRBD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupC-terminal domain in LINE-1 ORF1p(330.9)

TT-groupC-terminal domain in LINE-1 ORF1p(330.9.1)

FFamilyTnp_22_dsRBD(330.9.1.1)

Pfam Families

PF17490Tnp_22_dsRBD

L1 transposable element dsRBD-like domain

External Links

AlphaFold DB: A0A0G2JVX1 UniProt: A0A0G2JVX1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 291-355