ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5U4F0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5U4F0_F1_nD1

Q5U4F0_F1_nD1

UID: 003763034

AlphaFold

Range: 236-455
AlphaFold: AF-Q5U4F0
UniProt: Q5U4F0 (all domains)
Gene: Rrp8

Protein: Ribosomal RNA-processing protein 8 (EC 2.1.1.-) (Cerebral protein 1 homolog)

3D Structure

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Related Domains

Browse other domains in Methyltransf_8 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_8(2003.1.5.45)

Pfam Families

PF05148Methyltransf_8

Hypothetical methyltransferase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q5U4F0 UniProt: Q5U4F0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 236-455