ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D4A2R6_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/D4A2R6_F1_nD6

D4A2R6_F1_nD6

UID: 003763054

AlphaFold

Range: 841-930
AlphaFold: AF-D4A2R6
UniProt: D4A2R6 (all domains)
Gene: Usp40

Protein: Ubiquitin carboxyl-terminal hydrolase 40 (EC 3.4.19.12) (Deubiquitinating enzyme 40) (Ubiquitin thioesterase 40) (Ubiquitin-specific-processing protease 40)

3D Structure

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Related Domains

Browse other domains in UBL_USP40 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUBL_USP40(221.1.1.187)

Pfam Families

PF25822UBL_USP40

USP40 ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: D4A2R6 UniProt: D4A2R6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 841-930