ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O54747_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O54747_F1_nD1

O54747_F1_nD1

UID: 003763519

AlphaFold

Range: 76-140,246-300
AlphaFold: AF-O54747
UniProt: O54747 (all domains)
Gene: Pold1

Protein: DNA polymerase delta catalytic subunit (EC 2.7.7.7) (3'-5' exodeoxyribonuclease) (EC 3.1.11.-)

3D Structure

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Related Domains

Browse other domains in DNA_pol_B_exo1, REV3_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyDNA_pol_B_exo1, REV3_N(2.1.1.276)

Pfam Families

PF03104DNA_pol_B_exo1

DNA polymerase family B, exonuclease domain

ClanCL0219RNase_H

DNA polymerase zeta catalytic subunit, N-terminal

External Links

AlphaFold DB: O54747 UniProt: O54747

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-140,246-300