ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9ES53_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9ES53_F1_nD2

Q9ES53_F1_nD2

UID: 003763523

AlphaFold

Range: 116-195
AlphaFold: AF-Q9ES53
UniProt: Q9ES53 (all domains)
Gene: Ufd1

Protein: Ubiquitin recognition factor in ER-associated degradation protein 1 (Ubiquitin fusion degradation protein 1 homolog) (UB fusion protein 1)

3D Structure

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Related Domains

Browse other domains in UFD1_N2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCdc48 domain 2-like(229)

HH-groupCdc48 domain 2-like(229.1)

TT-groupCdc48 domain 2-like(229.1.1)

FFamilyUFD1_N2(229.1.1.8)

Pfam Families

PF24842UFD1_N2

Ubiquitin fusion degradation protein UFD1, N-terminal subdomain 2

ClanCL0402Cdc48_2-like

External Links

AlphaFold DB: Q9ES53 UniProt: Q9ES53

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 116-195