ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F1M8E6_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/F1M8E6_F1_nD4

F1M8E6_F1_nD4

UID: 003763527

AlphaFold

Range: 661-815
AlphaFold: AF-F1M8E6
UniProt: F1M8E6 (all domains)
Gene: Lig1

Protein: DNA ligase (EC 6.5.1.1)

3D Structure

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Related Domains

Browse other domains in DNA_ligase_A_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyDNA_ligase_A_C(2.1.1.31)

Pfam Families

PF04679DNA_ligase_A_C

ATP dependent DNA ligase C terminal region

ClanCL0021OB

External Links

AlphaFold DB: F1M8E6 UniProt: F1M8E6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 661-815