ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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M0R3X5_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/M0R3X5_F1_nD4

M0R3X5_F1_nD4

UID: 003763904

AlphaFold

Range: 636-730
AlphaFold: AF-M0R3X5
UniProt: M0R3X5 (all domains)
Gene: L1td1

Protein: LINE-1 type transposase domain-containing protein 1 (ES cell-associated protein 11)

3D Structure

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Related Domains

Browse other domains in Transposase_22 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyTransposase_22(304.9.1.5)

Pfam Families

PF02994Transposase_22

L1 transposable element RBD-like domain

ClanCL0221RRM

External Links

AlphaFold DB: M0R3X5 UniProt: M0R3X5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 636-730