ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D4A030_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/D4A030_F1_nD3

D4A030_F1_nD3

UID: 003765089

AlphaFold

Range: 426-439,466-540
AlphaFold: AF-D4A030
UniProt: D4A030 (all domains)
Gene: Ubp1

Protein: Upstream binding protein 1

3D Structure

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Related Domains

Browse other domains in GRHL1_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyGRHL1_C(221.1.1.163)

Pfam Families

PF25416GRHL1_C

GRHL1-like, C-terminal domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: D4A030 UniProt: D4A030

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 426-439,466-540