ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5PQP5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5PQP5_F1_nD1

Q5PQP5_F1_nD1

UID: 003765829

AlphaFold

Range: 11-165
AlphaFold: AF-Q5PQP5
UniProt: Q5PQP5 (all domains)
Gene: Slx1b

Protein: Structure-specific endonuclease subunit SLX1 (EC 3.1.-.-) (GIY-YIG domain-containing protein 1)

3D Structure

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Related Domains

Browse other domains in GIY-YIG →

Classification

AArchitecturea+b three layers(a.12)

XX-groupGIY-YIG endonuclease(821)

HH-groupGIY-YIG endonuclease(821.1)

TT-groupGIY-YIG endonuclease(821.1.1)

FFamilyGIY-YIG(821.1.1.1)

Pfam Families

PF01541GIY-YIG

GIY-YIG catalytic domain

ClanCL0418GIY-YIG

External Links

AlphaFold DB: Q5PQP5 UniProt: Q5PQP5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-165