ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D4ABN8_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/D4ABN8_F1_nD5

D4ABN8_F1_nD5

UID: 003766217

AlphaFold

Range: 646-910,1051-1175
AlphaFold: AF-D4ABN8
UniProt: D4ABN8 (all domains)
Gene: Xrn1

Protein: 5'-3' exoribonuclease 1 (EC 3.1.13.-)

3D Structure

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Related Domains

Browse other domains in SH3_12, XRN1_D1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilySH3_12, XRN1_D1(4.1.1.315)

Pfam Families

Xrn1 SH3-like domain

ClanCL0010SH3

PF18332XRN1_D1

Exoribonuclease Xrn1 D1 domain

ClanCL0010SH3

External Links

AlphaFold DB: D4ABN8 UniProt: D4ABN8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 646-910,1051-1175