ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5M887_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5M887_F1_nD2

Q5M887_F1_nD2

UID: 003767611

AlphaFold

Range: 171-300
AlphaFold: AF-Q5M887
UniProt: Q5M887 (all domains)
Gene: Trappc13

Protein: Trafficking protein particle complex subunit 13

3D Structure

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Related Domains

Browse other domains in TRAPPC13_M →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyTRAPPC13_M(11.1.1.668)

Pfam Families

PF23647TRAPPC13_M

Trafficking protein particle complex subunit 13, middle domain

ClanCL0159E-set

External Links

AlphaFold DB: Q5M887 UniProt: Q5M887

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 171-300