ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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F1M355_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/F1M355_F1_nD1

F1M355_F1_nD1

UID: 003768407

AlphaFold

Range: 96-300
AlphaFold: AF-F1M355
UniProt: F1M355 (all domains)
Gene: Nxf3

Protein: Tip-associated protein (Tip-associating protein) (mRNA export factor TAP)

3D Structure

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Related Domains

Browse other domains in Tap-RNA_bind →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyTap-RNA_bind(304.9.1.18)

Pfam Families

PF09162Tap-RNA_bind

Tap, RNA-binding

ClanCL0221RRM

External Links

AlphaFold DB: F1M355 UniProt: F1M355

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-300