ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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F1MAG8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/F1MAG8_F1_nD3

F1MAG8_F1_nD3

UID: 003768963

AlphaFold

Range: 586-685
AlphaFold: AF-F1MAG8
UniProt: F1MAG8 (all domains)
Gene: Sema3d

Protein: Semaphorin 3D

3D Structure

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Related Domains

Browse other domains in Ig_6 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyIg_6(11.1.1.271)

Pfam Families

Immunoglobulin domain

ClanCL0159E-set

External Links

AlphaFold DB: F1MAG8 UniProt: F1MAG8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 586-685