ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D3ZEM8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/D3ZEM8_F1_nD3

D3ZEM8_F1_nD3

UID: 003769105

AlphaFold

Range: 466-475,506-540,581-690
AlphaFold: AF-D3ZEM8
UniProt: D3ZEM8 (all domains)
Gene: Tsr1

Protein: Pre-rRNA-processing protein TSR1 homolog

3D Structure

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Related Domains

Browse other domains in RIBIOP_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAminomethyltransferase beta-barrel domain(1.1.8)

FFamilyRIBIOP_C(1.1.8.2)

Pfam Families

PF04950RIBIOP_C

40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal

ClanCL0866ALR_C-like

External Links

AlphaFold DB: D3ZEM8 UniProt: D3ZEM8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 466-475,506-540,581-690