ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D3Z8K5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/D3Z8K5_F1_nD1

D3Z8K5_F1_nD1

UID: 003769323

AlphaFold

Range: 1-420
AlphaFold: AF-D3Z8K5
UniProt: D3Z8K5 (all domains)
Gene: Usp38

Protein: ubiquitinyl hydrolase 1 (EC 3.4.19.12)

3D Structure

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Related Domains

Browse other domains in Usp38-like_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyUsp38-like_N(109.4.1.274)

Pfam Families

PF21246Usp38-like_N

Ubiquitin carboxyl-terminal hydrolase 38-like, N-terminal domain

ClanCL0020TPR

External Links

AlphaFold DB: D3Z8K5 UniProt: D3Z8K5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-420