ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D3ZDI9_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/D3ZDI9_F1_nD4

D3ZDI9_F1_nD4

UID: 003769341

AlphaFold

Range: 651-700
AlphaFold: AF-D3ZDI9
UniProt: D3ZDI9 (all domains)
Gene: Usp13

Protein: Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)

3D Structure

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Related Domains

Browse other domains in UBA_7 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyUBA_7(103.1.1.27)

Pfam Families

UBA-like domain

ClanCL0214UBA

External Links

AlphaFold DB: D3ZDI9 UniProt: D3ZDI9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 651-700