ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5XII0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5XII0_F1_nD1

Q5XII0_F1_nD1

UID: 003769884

AlphaFold

Range: 36-220
AlphaFold: AF-Q5XII0
UniProt: Q5XII0 (all domains)
Gene: Epdr1

Protein: Mammalian ependymin-related protein 1 (MERP-1)

3D Structure

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Related Domains

Browse other domains in Ependymin →

Classification

AArchitecturebeta meanders(a.2)

XX-groupLipoprotein localization factors LolAB(71)

HH-groupLipoprotein localization factors LolAB(71.1)

TT-groupLipoprotein localization factors LolAB(71.1.1)

FFamilyEpendymin(71.1.1.1)

Pfam Families

PF00811Ependymin

Ependymin

ClanCL0048LolA_LolB

External Links

AlphaFold DB: Q5XII0 UniProt: Q5XII0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-220