ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5XIH6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5XIH6_F1_nD2

Q5XIH6_F1_nD2

UID: 003770137

AlphaFold

Range: 121-325
AlphaFold: AF-Q5XIH6
UniProt: Q5XIH6 (all domains)
Gene: Trim54

Protein: Tripartite motif-containing protein 54 (RING finger protein 30)

3D Structure

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Related Domains

Browse other domains in zf-B_box →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical hairpin of HlyD-like secretion proteins(5086)

HH-grouphelical hairpin of HlyD-like secretion proteins(5086.1)

TT-grouphelical hairpin of HlyD-like secretion proteins(5086.1.1)

FFamilyzf-B_box(5086.1.1.194)

Pfam Families

PF00643zf-B_box

B-box zinc finger

ClanCL0782BBOX

External Links

AlphaFold DB: Q5XIH6 UniProt: Q5XIH6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 121-325