ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q99PJ8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q99PJ8_F1_nD1

Q99PJ8_F1_nD1

UID: 003770332

AlphaFold

Range: 46-130
AlphaFold: AF-Q99PJ8
UniProt: Q99PJ8 (all domains)

3D Structure

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Related Domains

Browse other domains in SCAN →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilySCAN(170.1.1.1)

Pfam Families

SCAN domain

ClanCL0148Viral_Gag

External Links

AlphaFold DB: Q99PJ8 UniProt: Q99PJ8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-130