ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A096MK92_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A096MK92_F1_nD1

A0A096MK92_F1_nD1

UID: 003772724

AlphaFold

Range: 21-55,126-580
AlphaFold: AF-A0A096MK92
UniProt: A0A096MK92 (all domains)
Gene: Ift88

Protein: Intraflagellar transport 88

3D Structure

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Related Domains

Browse other domains in TPR_1, ANAPC3, TPR_8, TPR_12, TPR_16 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_1, ANAPC3, TPR_8, TPR_12, TPR_16(109.4.1.1294)

Pfam Families

Tetratricopeptide repeat

ClanCL0020TPR

Anaphase-promoting complex, cyclosome, subunit 3

ClanCL0020TPR

Tetratricopeptide repeat

ClanCL0020TPR

Tetratricopeptide repeat

ClanCL0020TPR

External Links

AlphaFold DB: A0A096MK92 UniProt: A0A096MK92

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-55,126-580

Tetratricopeptide repeat

ClanCL0020TPR