ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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P0C279_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P0C279_F1_nD1

P0C279_F1_nD1

UID: 003772766

AlphaFold

Range: 296-415
AlphaFold: AF-P0C279
UniProt: P0C279 (all domains)
Gene: Cpeb1

Protein: Cytoplasmic polyadenylation element-binding protein 1 (CPE-BP1) (CPE-binding protein 1) (CPEB) (CPEB-1)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_7(304.9.1.25)

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

AlphaFold DB: P0C279 UniProt: P0C279

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 296-415