ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F1LNJ2_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/F1LNJ2_F1_nD4

F1LNJ2_F1_nD4

UID: 003774181

AlphaFold

Range: 426-885
AlphaFold: AF-F1LNJ2
UniProt: F1LNJ2 (all domains)
Gene: Snrnp200

Protein: U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13) (BRR2 homolog) (U5 snRNP-specific 200 kDa protein) (U5-200KD)

3D Structure

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Related Domains

Browse other domains in DEAD+Helicase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDEAD+Helicase_C(2004.1.1.364)

Pfam Families

DEAD/DEAH box helicase

ClanCL0023P-loop_NTPase

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: F1LNJ2 UniProt: F1LNJ2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 426-885