ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3kk5E1 - ECOD Domain | ECOD

ECOD/Domains/e3kk5E1

e3kk5E1

UID: 000377502

PDB

Range: E:25-221
PDB: 3KK5 chain E(all domains)
UniProt: P30328 (all domains)
Gene: A430L

Molecule: Major capsid protein (MCP) (Vp54)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Capsid_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCapsid_N(10.2.1.54)

Pfam Families

PF16903Capsid_N

Major capsid protein N-terminus

ClanCL0611Hexon

External Links

ECOD PDB View: 3KK5 RCSB PDB: 3KK5 PDBe: 3KK5 UniProt: P30328

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure