ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5M9F5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5M9F5_F1_nD1

Q5M9F5_F1_nD1

UID: 003775343

AlphaFold

Range: 1-250
AlphaFold: AF-Q5M9F5
UniProt: Q5M9F5 (all domains)
Gene: Dph6

Protein: Diphthine--ammonia ligase (EC 6.3.1.14) (ATP-binding domain-containing protein 4) (Diphthamide synthase) (Diphthamide synthetase) (Protein DPH6 homolog)

3D Structure

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Related Domains

Browse other domains in Diphthami_syn_2, Diphthami_syn_2_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyDiphthami_syn_2, Diphthami_syn_2_C(2005.1.1.54)

Pfam Families

PF01902Diphthami_syn_2_N

Diphthamide synthase N-terminal domain

ClanCL0039HUP

PF28410Diphthami_syn_2_C

Diphthamide synthase C-terminal domain

External Links

AlphaFold DB: Q5M9F5 UniProt: Q5M9F5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-250