ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F1LTR0_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/F1LTR0_F1_nD4

F1LTR0_F1_nD4

UID: 003776022

AlphaFold

Range: 121-190,406-625,761-810
AlphaFold: AF-F1LTR0
UniProt: F1LTR0 (all domains)
Gene: Greb1l

Protein: GREB1 like retinoic acid receptor coactivator

3D Structure

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Related Domains

Browse other domains in GREB1_2nd, cpSF2-GREB1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGREB1_2nd, cpSF2-GREB1(2004.1.1.706)

Pfam Families

PF20688GREB1_2nd

GREB1, second domain

PF20692cpSF2-GREB1

Circularly permuted SF2 helicase found in GREB1 proteins

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: F1LTR0 UniProt: F1LTR0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 121-190,406-625,761-810