ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D3ZGD0_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/D3ZGD0_F1_nD3

D3ZGD0_F1_nD3

UID: 003778476

AlphaFold

Range: 846-1290,1336-1345,1446-1495
AlphaFold: AF-D3ZGD0
UniProt: D3ZGD0 (all domains)
Gene: Gemin5

Protein: Gem-associated protein 5

3D Structure

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Related Domains

Browse other domains in TPR_GEMI5, GEMI5_RBS →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_GEMI5, GEMI5_RBS(109.4.1.2034)

Pfam Families

PF23774TPR_GEMI5

GEMI5 TPR domain

ClanCL0020TPR

PF23777GEMI5_RBS

GEMI5 RBS C-terminal domain

External Links

AlphaFold DB: D3ZGD0 UniProt: D3ZGD0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 846-1290,1336-1345,1446-1495