ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D4A0U6_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/D4A0U6_F1_nD5

D4A0U6_F1_nD5

UID: 003778788

AlphaFold

Range: 646-780
AlphaFold: AF-D4A0U6
UniProt: D4A0U6 (all domains)
Gene: Lig4

Protein: DNA ligase (EC 6.5.1.1)

3D Structure

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Related Domains

Browse other domains in BRCT+DNA_ligase_IV →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupBRCT domain(7568)

HH-groupBRCT domain(7568.1)

TT-groupBRCT domain(7568.1.1)

FFamilyBRCT+DNA_ligase_IV(7568.1.1.16)

Pfam Families

BRCA1 C Terminus (BRCT) domain

ClanCL0459BRCT-like

PF11411DNA_ligase_IV

DNA ligase IV

External Links

AlphaFold DB: D4A0U6 UniProt: D4A0U6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 646-780