ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D3ZRZ2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/D3ZRZ2_F1_nD2

D3ZRZ2_F1_nD2

UID: 003779232

AlphaFold

Range: 31-215
AlphaFold: AF-D3ZRZ2
UniProt: D3ZRZ2 (all domains)
Gene: Mmp1b

Protein: interstitial collagenase (EC 3.4.24.7)

3D Structure

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Related Domains

Browse other domains in Peptidase_M10 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M10(2498.1.1.1)

Pfam Families

PF00413Peptidase_M10

Matrixin

ClanCL0126Peptidase_MA

External Links

AlphaFold DB: D3ZRZ2 UniProt: D3ZRZ2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-215